PHATRDRAFT_20716 rna binding motif protein 8 (RRM_RBM8)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_20716	chr_9	rna binding motif protein 8 (RRM_RBM8)	916342	916758	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0206

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0021	0.40

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RRM_RBM8		RNA recognition motif in RNA-binding protein RBM8A, RBM8B nd similar proteins; This subfamily...	cl17169	162.772	2.32E-52	38 - 125	specific	240770
RRM_SF superfamily		RNA recognition motif (RRM) superfamily; RRM, also known as RBD (RNA binding domain) or RNP (...	-	162.772	2.32E-52	38 - 125	superfamily	266524
COG0724		RNA-binding proteins (RRM domain) [General function prediction only]	-	67.6646	1.66E-14	37 - 123	multi-dom	223796

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
18841		Not available	270812	301474	413981	Cre12.g526750.t1.2	AT1G51510.1	317912

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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