PHATRDRAFT_20948 cytochrome c isoform 1 (Cytochrom_C superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_20948	chr_11	cytochrome c isoform 1 (Cytochrom_C superfamily)	94151	94663	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0147

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0165	0.45	0.041 2100

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Cytochrom_C superfamily		Cytochrome c; The Pfam entry does not include all Prosite members. The cytochrome 556 and...	-	166.572	4.43E-54	4 - 99	superfamily	264358
CccA		Cytochrome c, mono- and diheme variants [Energy production and conversion]	-	39.9861	1.47E-05	6 - 100	multi-dom	224921

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
41530		Not available	272236	237074	431150	Cre12.g522600.t1.2	AT4G10040.1	316376

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments