PHATRDRAFT_21829 2-c-methyl-d-erythritol 4-phosphate cytidyltransferase (CDP-ME_synthetase)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_21829	chr_14	2-c-methyl-d-erythritol 4-phosphate cytidyltransferase (CDP-ME_synthetase)	480692	481507	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0179

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0015	0.37	210 87000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CDP-ME_synthetase		CDP-ME synthetase is involved in mevalonate-independent isoprenoid production; 4-diphosphocytidyl-2...	cl11394	228.947	1.76E-74	25 - 254	specific	133009
Glyco_tranf_GTA_type superfamily		Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a...	-	228.947	1.76E-74	25 - 254	superfamily	264347

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
3622		Not available	273875	302582	443903	Cre16.g679669.t1.1	AT2G02500.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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