PHATRDRAFT_22019 isovaleryl-coa dehydrogenase (PTZ00461)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_22019	chr_15	isovaleryl-coa dehydrogenase (PTZ00461)	431753	433163	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0340

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0046	0.37	0.0024 2700

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ACAD superfamily		Acyl-CoA dehydrogenase; Both mitochondrial acyl-CoA dehydrogenases (ACAD) and peroxisomal acyl-CoA...	-	354.795	7.40E-119	43 - 430	superfamily	263927
PTZ00461		isovaleryl-CoA dehydrogenase; Provisional	-	397.001	5.75E-135	17 - 430	multi-dom	185640

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
269513		Not available	278364	236454	435778	Not available	AT3G45300.1	553331

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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