PHATRDRAFT_22319 importin alpha-2 (SRP1)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_22319 chr_16 importin alpha-2 (SRP1) 702134 704031 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0100

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0174
 0.15

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ARM superfamily Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence... - 53.4723 8.66E-09 346 - 471 superfamily 237987
ARM superfamily Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence... - 53.4723 8.66E-09 346 - 471 superfamily 237987
ARM superfamily Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence... - 53.4723 8.66E-09 346 - 471 superfamily 237987
ARM superfamily Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence... - 53.4723 8.66E-09 346 - 471 superfamily 237987
ARM superfamily Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence... - 53.4723 8.66E-09 346 - 471 superfamily 237987
ARM superfamily Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence... - 53.4723 8.66E-09 346 - 471 superfamily 237987
IBB superfamily Importin beta binding domain; This family consists of the importin alpha (karyopherin alpha),... - 48.9162 2.49E-07 10 - 67 superfamily 201951
SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion] - 289.868 3.82E-90 15 - 542 multi-dom 227396

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 225992 94957 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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