PHATRDRAFT_231 dna-dependent atpase snf2h (SNF2_N)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_231 chr_10 dna-dependent atpase snf2h (SNF2_N) 38474 41667 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0239

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 115.413 1.66E-29 454 - 576 superfamily 238034
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 115.413 1.66E-29 454 - 576 superfamily 238034
DEXDc DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... cl17251 84.6964 8.69E-19 139 - 307 specific 238005
DEXDc superfamily DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... - 84.6964 8.69E-19 139 - 307 superfamily 266587
SLIDE superfamily SLIDE; The SLIDE domain adopts a secondary structure comprising a main core of three alpha-helices... - 59.1345 2.90E-10 861 - 970 superfamily 255188
SNF2_N SNF2 family N-terminal domain; This domain is found in proteins involved in a variety of processes... - 336.181 5.04E-107 122 - 434 multi-dom 249654

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 418722 Cre12.g508150.t1.2 AT5G18620.1 467062

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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