PHATRDRAFT_23164 peptidyl-prolyl cis-transcyclophilin-type family protein (cyclophilin_ABH_like)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_23164 chr_22 peptidyl-prolyl cis-transcyclophilin-type family protein (cyclophilin_ABH_like) 40674 42315 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0101

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0060
 0.37

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
cyclophilin_ABH_like cyclophilin_ABH_like: Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans... cl00197 302.254 7.00E-101 315 - 481 specific 238907
cyclophilin superfamily cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic... - 302.254 7.00E-101 315 - 481 superfamily 260252
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 67.4052 1.01E-13 146 - 261 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 67.4052 1.01E-13 146 - 261 superfamily 238112
FKBP_C FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidyl-prolyl cis-trans isomerase. cl19519 127.357 1.98E-35 34 - 124 specific 249719
FKBP_C superfamily FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidyl-prolyl cis-trans isomerase. - 127.357 1.98E-35 34 - 124 superfamily 267872
TPR_11 TPR repeat; TPR repeat. - 46.1527 1.17E-06 143 - 224 multi-dom 257739
TPR_11 TPR repeat; TPR repeat. - 46.1527 1.17E-06 143 - 224 multi-dom 257739

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
31535 Not available 210825 248839 Not available Cre01.g047700.t1.2 Not available 537442

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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