PHATRDRAFT_23833 prolyl-trna synthetase-like (YbaK_like)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_23833	chr_27	prolyl-trna synthetase-like (YbaK_like)	322220	322969	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0373

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0205	0.32	0.32 1300

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
YbaK_like		YbaK-like. The YbaK family of deacylase domains includes the INS amino acid-editing domain of the...	cl00022	82.2057	1.08E-19	78 - 231	specific	239824
YbaK_like superfamily		YbaK-like. The YbaK family of deacylase domains includes the INS amino acid-editing domain of the...	-	82.2057	1.08E-19	78 - 231	superfamily	260143

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
1979		Not available	177788	192277	56719	Cre07.g338250.t1.1	AT4G16510.1	565874

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments