PHATRDRAFT_23850 at1g34430 f7p12_2 (PRK11856)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_23850 chr_27 at1g34430 f7p12_2 (PRK11856) 369599 371624 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0175

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0034
 0.35

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
lipoyl_domain Lipoyl domain of the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases. 2-... cl11404 107.49 1.27E-28 44 - 117 specific 133458
Biotinyl_lipoyl_domains superfamily Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the... - 107.49 1.27E-28 44 - 117 superfamily 264355
2-oxoacid_dh superfamily 2-oxoacid dehydrogenases acyltransferase (catalytic domain); These proteins contain one to three... - 212.026 1.83E-65 267 - 470 superfamily 249671
2-oxoacid_dh superfamily 2-oxoacid dehydrogenases acyltransferase (catalytic domain); These proteins contain one to three... - 212.026 1.83E-65 267 - 470 superfamily 249671
E3_binding superfamily e3 binding domain; This family represents a small domain of the E2 subunit of 2-oxo-acid... - 59.7449 1.43E-11 185 - 223 superfamily 251550
E3_binding superfamily e3 binding domain; This family represents a small domain of the E2 subunit of 2-oxo-acid... - 59.7449 1.43E-11 185 - 223 superfamily 251550
PRK11856 branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed - 396.469 3.60E-134 44 - 470 multi-dom 237001

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 166615 180577 448908 Not available AT1G34430.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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