PHATRDRAFT_24186 exportincrm1 homolog (CRM1)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_24186 chr_31 exportincrm1 homolog (CRM1) 82687 86049 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0037

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CRM1_C CRM1 C terminal; CRM1 (also known as Exportin1) mediates the nuclear export of proteins bearing a... cl07396 385.572 2.82E-124 720 - 1046 specific 198170
CRM1_C superfamily CRM1 C terminal; CRM1 (also known as Exportin1) mediates the nuclear export of proteins bearing a... - 385.572 2.82E-124 720 - 1046 superfamily 263334
Xpo1 superfamily Exportin 1-like protein; The sequences featured in this family are similar to a region close to the... - 155.084 4.06E-43 118 - 263 superfamily 254770
Xpo1 superfamily Exportin 1-like protein; The sequences featured in this family are similar to a region close to the... - 155.084 4.06E-43 118 - 263 superfamily 254770
IBN_N Importin-beta N-terminal domain; Members of the importin-beta (karyopherin-beta) family can bind... cl04271 64.5721 1.91E-12 40 - 106 specific 197981
IBN_N superfamily Importin-beta N-terminal domain; Importin-beta N-terminal domain. - 64.5721 1.91E-12 40 - 106 superfamily 262079
CRM1 Importin beta-related nuclear transport receptor [Nuclear structure / Intracellular trafficking and... - 1031.04 0 18 - 1049 multi-dom 227432

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
268616 Not available 265181 238543 464769 Cre03.g146487.t1.1 AT5G17020.1 509857

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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