PHATRDRAFT_24820 ch61_maizechaperonin cpn60-mitochondrial precursor (hsp60-1) (groEL)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_24820	chr_1	ch61_maizechaperonin cpn60-mitochondrial precursor (hsp60-1) (groEL)	1669161	1671203	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0147

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0195	0.22	80 21000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
GroEL		GroEL_like type I chaperonin. Chaperonins are involved in productive folding of proteins. They...	cl02777	861.378	0	28 - 552	specific	239460
chaperonin_like superfamily		chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share...	-	861.378	0	28 - 552	superfamily	261443
groEL		chaperonin GroEL; Reviewed	-	750.395	0	27 - 554	multi-dom	237231

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
38191		Not available	265209	317826	459873	Cre06.g309100.t1.2	AT3G23990.1	549587

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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