PHATRDRAFT_24915 regulator of telomere length splice variant isoform 4 (rad3)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_24915 chr_1 regulator of telomere length splice variant isoform 4 (rad3) 1903581 1906055 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0314

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DEXDc superfamily DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... - 202.994 4.20E-59 46 - 318 superfamily 266587
Helicase_C_2 Helicase C-terminal domain; This domain is the second of two tandem AAA domains found in a wide... cl17460 168.143 2.82E-48 544 - 757 specific 257644
Helicase_C_2 superfamily Helicase C-terminal domain; This domain is the second of two tandem AAA domains found in a wide... - 168.143 2.82E-48 544 - 757 superfamily 266701
rad3 DNA repair helicase (rad3); All proteins in this family for which funcitons are known are DNA-DNA... - 379.832 7.05E-120 45 - 768 multi-dom 233047

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
32522 Not available 136107 200477 198134 Cre02.g089608.t1.2 AT1G79950.1 485995

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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