PHATRDRAFT_25217 abc transporter family protein (3a01204)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_25217	chr_2	abc transporter family protein (3a01204)	318295	320297	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0354

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0242	0.42	740 10000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ABC_ATPase superfamily		ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of...	-	211.641	3.12E-64	46 - 280	superfamily	266551
ABC2_membrane		ABC-2 type transporter; ABC-2 type transporter.	cl17235	125.448	9.07E-33	366 - 577	specific	250332
ABC2_membrane superfamily		ABC-2 type transporter; ABC-2 type transporter.	-	125.448	9.07E-33	366 - 577	superfamily	266576
3a01204		The Eye Pigment Precursor Transporter (EPP) Family protein; [Transport and binding proteins, Other].	-	335.093	1.20E-105	68 - 631	multi-dom	233207

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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