PHATRDRAFT_2527 tbc1 domainmember 13 (TBC)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_2527	chr_21	tbc1 domainmember 13 (TBC)	172971	174086	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0374

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0013	0.38	0.0000016 5200

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TBC		Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs; Widespread domain present in Gyp6 and Gyp7,...	cl02495	140.905	8.23E-40	11 - 310	specific	214540
RabGAP-TBC superfamily		Rab-GTPase-TBC domain; Identification of a TBC domain in GYP6_YEAST and GYP7_YEAST, which are...	-	140.905	8.23E-40	11 - 310	superfamily	261308

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
264023		Not available	140646	96105	Not available	Cre03.g195700.t1.1	AT4G13730.1	392357

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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