PHATRDRAFT_2542 afg1-family atpasePhaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_2542	chr_21	afg1-family atpase	595072	596322	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0258

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0076	0.38	820 14

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AAA		The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an...	cl18944	39.4367	0.000391235	76 - 218	specific	99707
AAA superfamily		The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an...	-	39.4367	0.000391235	76 - 218	superfamily	267297

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
38813		Not available	139015	252492	448420	Cre14.g619350.t1.2	AT4G30490.1	563705

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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