PHATRDRAFT_25495 dna-directed polymerase kappa (PolY_Pol_IV_kappa)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_25495	chr_2	dna-directed polymerase kappa (PolY_Pol_IV_kappa)	1285955	1287457	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0046

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0064	0.31	77 11000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PolY_Pol_IV_kappa		DNA Polymerase IV/Kappa; Pol IV, also known as Pol kappa, DinB, and Dpo4, is a translesion...	cl12025	303.674	2.78E-99	82 - 445	specific	176459
PolY superfamily		Y-family of DNA polymerases; Y-family DNA polymerases are a specialized subset of polymerases that...	-	303.674	2.78E-99	82 - 445	superfamily	264514
PRK02406		DNA polymerase IV; Validated	-	208.819	8.71E-63	84 - 440	multi-dom	235035

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
41636		Not available	194538	157356	68295	Cre02.g079850.t1.1	AT1G49980.1	552269

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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