PHATRDRAFT_26742 b-glycoside hydrolase family 3 protein (PRK15098)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_26742 chr_6 b-glycoside hydrolase family 3 protein (PRK15098) 278325 281186 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0328

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0139
 0.32

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
BglX Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] cl07971 199.162 3.40E-56 30 - 442 specific 224389
Glyco_hydro_3 superfamily Glycosyl hydrolase family 3 N terminal domain; Glycosyl hydrolase family 3 N terminal domain. - 199.162 3.40E-56 30 - 442 superfamily 263517
Glyco_hydro_3_C Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be... cl08459 139.379 7.04E-37 407 - 642 specific 250964
Glyco_hydro_3_C superfamily Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be... - 139.379 7.04E-37 407 - 642 superfamily 263668
Fn3-like superfamily Fibronectin type III-like domain; This domain has a fibronectin type III-like structure. It is... - 52.4023 2.13E-08 675 - 742 superfamily 258486
Fn3-like superfamily Fibronectin type III-like domain; This domain has a fibronectin type III-like structure. It is... - 52.4023 2.13E-08 675 - 742 superfamily 258486
PRK15098 beta-D-glucoside glucohydrolase; Provisional - 281.956 7.63E-82 19 - 744 multi-dom 185053

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 182486 296016 235923 Not available AT3G47000.1 474751

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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