PHATRDRAFT_28191 succinic semialdehyde dehydrogenase (ALDH_F5_SSADH_GabD)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_28191	chr_11	succinic semialdehyde dehydrogenase (ALDH_F5_SSADH_GabD)	376183	377952	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0319

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0055	0.36	1500 14000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ALDH_F5_SSADH_GabD		Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like;...	cl11961	682.236	0	61 - 527	specific	143421
ALDH-SF superfamily		NAD(P)+-dependent aldehyde dehydrogenase superfamily; The aldehyde dehydrogenase superfamily (ALDH-...	-	682.236	0	61 - 527	superfamily	264488

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
268262		Not available	275063	240136	443869	Cre08.g381702.t1.1	AT1G79440.1	489802

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments