PHATRDRAFT_28652 lipoate synthase (PRK05481)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_28652	chr_13	lipoate synthase (PRK05481)	282482	283507	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0017

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0017	0.46	260000 300000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Radical_SAM superfamily		Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and...	-	41.5502	8.30E-05	66 - 245	superfamily	100105
Radical_SAM superfamily		Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and...	-	41.5502	8.30E-05	66 - 245	superfamily	100105
PRK05481		lipoyl synthase; Provisional	-	434.515	2.39E-153	1 - 300	multi-dom	235493

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
31673		Not available	172004	195138	426269	Cre02.g114400.t1.2	AT5G08415.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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