PHATRDRAFT_28689 dead (asp-glu-ala-asp) box polypeptide 51 (DEXDc superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_28689 chr_13 dead (asp-glu-ala-asp) box polypeptide 51 (DEXDc superfamily) 473217 474758 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0388

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0075
 0.22

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 85.7524 4.12E-20 331 - 441 superfamily 238034
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 85.7524 4.12E-20 331 - 441 superfamily 238034
DEXDc superfamily DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... - 143.779 4.00E-40 17 - 268 superfamily 266587
DEXDc DEAD-like helicases superfamily; DEAD-like helicases superfamily. - 122.215 1.95E-32 23 - 270 multi-dom 214692

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
40402 Not available 181138 252649 Not available Cre07.g319750.t1.2 AT4G15850.1 258291

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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