PHATRDRAFT_28694 receptor of activated protein kinase ccomponent of 40s small ribosomal subunit (WD40)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_28694	chr_13	receptor of activated protein kinase ccomponent of 40s small ribosomal subunit (WD40)	475027	476059	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0146

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0133	0.27	7.9 370

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
WD40 superfamily		WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions...	-	254.952	5.26E-83	8 - 315	superfamily	238121
WD40 superfamily		WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions...	-	254.952	5.26E-83	8 - 315	superfamily	238121
COG2319		FOG: WD40 repeat [General function prediction only]	-	127.512	2.35E-33	2 - 314	multi-dom	225201

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
26063		Not available	189250	300319	77411	Cre06.g278222.t1.1	AT3G18130.1	355000

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments