PHATRDRAFT_29174 importin alpha (SRP1)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_29174 chr_15 importin alpha (SRP1) 560238 562148 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0167

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ARM superfamily Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence... - 94.6887 5.17E-23 292 - 452 superfamily 237987
ARM superfamily Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence... - 94.6887 5.17E-23 292 - 452 superfamily 237987
ARM superfamily Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence... - 94.6887 5.17E-23 292 - 452 superfamily 237987
ARM superfamily Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence... - 94.6887 5.17E-23 292 - 452 superfamily 237987
ARM superfamily Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence... - 94.6887 5.17E-23 292 - 452 superfamily 237987
ARM superfamily Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence... - 94.6887 5.17E-23 292 - 452 superfamily 237987
IBB superfamily Importin beta binding domain; This family consists of the importin alpha (karyopherin alpha),... - 60.8574 1.93E-11 6 - 109 superfamily 201951
SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion] - 605.347 0 15 - 540 multi-dom 227396

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
43097 Not available 259093 39955 460128 Cre04.g215850.t1.2 AT1G09270.3 354318

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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