PHATRDRAFT_29793 methyltransferase family member 1 (RF_mod_PrmC)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_29793	chr_19	methyltransferase family member 1 (RF_mod_PrmC)	52113	53387	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0192

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0013	0.38	0.0000016 5200

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AdoMet_MTases		S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases...	cl17173	48.5803	2.01E-07	246 - 332	specific	100107
AdoMet_MTases superfamily		S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases...	-	48.5803	2.01E-07	246 - 332	superfamily	266528
RF_mod_PrmC		protein-(glutamine-N5) methyltransferase, release factor-specific; Members of this protein family...	-	212.714	9.39E-66	166 - 416	multi-dom	234248

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
261490		Not available	151278	310600	417886	Not available	AT5G64150.1	322935

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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