PHATRDRAFT_30067 26s proteasome regulatory particle triple-a atpase subunit6 (RPT1)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_30067 chr_20 26s proteasome regulatory particle triple-a atpase subunit6 (RPT1) 388362 389777 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0183

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0125
 0.29

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... cl18944 102.609 2.88E-26 150 - 315 specific 99707
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 102.609 2.88E-26 150 - 315 superfamily 267297
RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover,... - 552.642 0 16 - 401 multi-dom 224143

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
32037 Not available 272982 195799 456589 Cre04.g216600.t1.2 AT5G20000.1 546373

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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