PHATRDRAFT_30139 rab gtpase (Rab8_Rab10_Rab13_like)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_30139 chr_21 rab gtpase (Rab8_Rab10_Rab13_like) 36644 37267 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0184

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Rab8_Rab10_Rab13_like Rab GTPase families 8, 10, 13 (Rab8, Rab10, Rab13); Rab8/Sec4/Ypt2 are known or suspected to be... cl17170 314.206 1.30E-109 11 - 177 specific 206659
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 314.206 1.30E-109 11 - 177 superfamily 266525
PLN03108 Rab family protein; Provisional - 188.997 6.75E-60 10 - 207 multi-dom 178655

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
33199 Not available 274606 313486 439586 Not available Not available 353544

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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