PHATRDRAFT_30246 zinc-containing alcohol dehydrogenase superfamily (CAD1)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_30246	chr_21	zinc-containing alcohol dehydrogenase superfamily (CAD1)	592957	594033	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0488

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0004	0.65	290000 320000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CAD1		Cinnamyl alcohol dehydrogenases (CAD); Cinnamyl alcohol dehydrogenases (CAD), members of the medium...	cl16912	435.002	3.41E-152	10 - 354	specific	176186
MDR superfamily		Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family; The...	-	435.002	3.41E-152	10 - 354	superfamily	266485
AdhP		Zn-dependent alcohol dehydrogenases [General function prediction only]	-	314.911	4.89E-105	6 - 356	multi-dom	223992

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	268209	Not available	223221	Cre14.g623650.t1.2	AT4G37970.1	287119

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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