PHATRDRAFT_30389 ubc1p like ubiquitin-conjugating enzyme e2 fused to a uba domain (ubc+uba) (UBCc)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_30389	chr_22	ubc1p like ubiquitin-conjugating enzyme e2 fused to a uba domain (ubc+uba) (UBCc)	410939	411609	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0349

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0100	0.43	0.00031 180000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
UBCc		Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated...	cl00154	197.425	2.20E-64	10 - 149	specific	238117
UBCc superfamily		Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated...	-	197.425	2.20E-64	10 - 149	superfamily	260221
UBA		Ubiquitin Associated domain. The UBA domain is a commonly occurring sequence motif in some members...	cl00153	43.6019	8.58E-07	159 - 195	specific	238116
UBA superfamily		Ubiquitin Associated domain. The UBA domain is a commonly occurring sequence motif in some members...	-	43.6019	8.58E-07	159 - 195	superfamily	260220

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
10985		Not available	273070	324286	429671	Cre01.g046850.t1.2	AT5G50870.1	261502

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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