PHATRDRAFT_30394 receptor mediated endocytosis family member (rme-1) (EHD)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_30394 chr_22 receptor mediated endocytosis family member (rme-1) (EHD) 438339 440340 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0083

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0067
 0.34

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EHD Eps15 homology domain (EHD), C-terminal domain; Dynamin-like C-terminal Eps15 homology domain (EHD... cl17170 416.289 2.81E-143 66 - 305 specific 206740
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 416.289 2.81E-143 66 - 305 superfamily 266525
EH superfamily Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal... - 74.5634 1.71E-16 469 - 530 superfamily 238009
EH superfamily Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal... - 74.5634 1.71E-16 469 - 530 superfamily 238009
EH Eps15 homology domain; Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF)... - 100.044 3.39E-25 450 - 549 multi-dom 197477

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
24736 Not available 226667 319388 443014 Cre06.g260950.t1.2 AT4G05520.1 529936

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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