PHATRDRAFT_30486 40s ribosomal protein s18 (PTZ00134)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_30486	chr_23	40s ribosomal protein s18 (PTZ00134)	220616	221287	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0151

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0197	0.17	33 41000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PTZ00134		40S ribosomal protein S18; Provisional	cl00331	239.546	1.91E-81	1 - 144	specific	185469
Ribosomal_S13 superfamily		Ribosomal protein S13/S18; This family includes ribosomal protein S13 from prokaryotes and S18 from...	-	239.546	1.91E-81	1 - 144	superfamily	260360

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
26893		Not available	268465	246711	443828	Cre06.g272950.t1.1	AT4G09800.1	353469

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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