PHATRDRAFT_30572 seryl-trna synthetase (PLN02678)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_30572 chr_24 seryl-trna synthetase (PLN02678) 110228 111685 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0142

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0133
 0.27

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SerRS_core Seryl-tRNA synthetase (SerRS) class II core catalytic domain. SerRS is responsible for the... cl00268 433.524 1.58E-150 139 - 433 specific 238393
class_II_aaRS-like_core superfamily Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA... - 433.524 1.58E-150 139 - 433 superfamily 260313
Seryl_tRNA_N superfamily Seryl-tRNA synthetase N-terminal domain; This domain is found associated with the Pfam tRNA... - 82.2608 5.06E-19 3 - 114 superfamily 251274
Seryl_tRNA_N superfamily Seryl-tRNA synthetase N-terminal domain; This domain is found associated with the Pfam tRNA... - 82.2608 5.06E-19 3 - 114 superfamily 251274
PLN02678 seryl-tRNA synthetase - 799.686 0 2 - 457 multi-dom 215364

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
269399 Not available 192640 245795 421500 Cre03.g189400.t1.2 AT5G27470.1 537011

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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