PHATRDRAFT_30578 short chain dehydrogenase oxidoreductase (NADB_Rossmann superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_30578	chr_24	short chain dehydrogenase oxidoreductase (NADB_Rossmann superfamily)	130696	131754	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0157

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0100	0.43	0.00031 180000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
NADB_Rossmann superfamily		Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD...	-	40.4447	0.000375286	9 - 79	superfamily	263925
NADB_Rossmann superfamily		Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD...	-	40.4447	0.000375286	9 - 79	superfamily	263925
FabG		Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [...	-	119.922	1.34E-31	41 - 271	multi-dom	223959

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	264517	Not available	Not available	Not available	Not available	555144

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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