PHATRDRAFT_30908 excision repair cross-complementing rodent repaircomplementation group 4 (rad1)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_30908 chr_27 excision repair cross-complementing rodent repaircomplementation group 4 (rad1) 64350 67373 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0343

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ERCC4 ERCC4 domain; This domain is a family of nucleases. The family includes EME1 which is an essential... cl10594 95.5524 1.49E-22 747 - 877 specific 251501
ERCC4 superfamily ERCC4 domain; This domain is a family of nucleases. The family includes EME1 which is an essential... - 95.5524 1.49E-22 747 - 877 superfamily 264010
HHH_5 Helix-hairpin-helix domain; Helix-hairpin-helix domain. cl14815 36.0204 0.00645578 919 - 973 specific 258660
H3TH_StructSpec-5'-nucleases superfamily H3TH domains of structure-specific 5' nucleases (or flap endonuclease-1-like) involved in... - 36.0204 0.00645578 919 - 973 superfamily 265460
rad1 DNA repair protein (rad1); All proteins in this family for which functions are known are components... - 583.697 0 156 - 972 multi-dom 233041

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
22869 Not available 208467 230429 457443 Cre06.g311400.t1.2 AT5G41150.1 327253

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments