PHATRDRAFT_30925 novel protein (zgc:63497) (SUA7)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_30925 chr_27 novel protein (zgc:63497) (SUA7) 152655 154717 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0372

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CYCLIN Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control.... cl00050 48.0037 4.13E-07 156 - 241 specific 238003
CYCLIN superfamily Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control.... - 48.0037 4.13E-07 156 - 241 superfamily 260157
CYCLIN Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control.... cl00050 48.0037 4.13E-07 156 - 241 specific 238003
CYCLIN superfamily Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control.... - 48.0037 4.13E-07 156 - 241 superfamily 260157
BRF1 superfamily Brf1-like TBP-binding domain; This region covers both the Brf homology II and III regions. This... - 69.9824 1.64E-14 470 - 575 superfamily 254398
BRF1 superfamily Brf1-like TBP-binding domain; This region covers both the Brf homology II and III regions. This... - 69.9824 1.64E-14 470 - 575 superfamily 254398
TF_Zn_Ribbon superfamily TFIIB zinc-binding; The transcription factor TFIIB contains a zinc-binding motif near the N-... - 52.656 5.68E-09 69 - 106 superfamily 254699
TF_Zn_Ribbon superfamily TFIIB zinc-binding; The transcription factor TFIIB contains a zinc-binding motif near the N-... - 52.656 5.68E-09 69 - 106 superfamily 254699
SUA7 Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [... - 208.711 4.15E-62 69 - 337 multi-dom 224323

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
2130 Not available 223581 14785 97524 Cre06.g256420.t1.2 AT2G45100.1 347658

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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