PHATRDRAFT_31322 (EFh)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_31322 chr_31 (EFh) 106378 108167 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0095

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0013
 0.38

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 66.8025 8.04E-14 282 - 339 superfamily 238008
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 66.8025 8.04E-14 282 - 339 superfamily 238008
Na_Ca_ex superfamily Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral membrane... - 45.6708 3.81E-06 415 - 548 superfamily 250805
Na_Ca_ex superfamily Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral membrane... - 45.6708 3.81E-06 415 - 548 superfamily 250805
EF-hand_7 EF-hand domain pair; EF-hand domain pair. - 53.9269 2.84E-09 287 - 339 multi-dom 257819

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
269232 Not available 261156 250123 Not available Not available AT1G53210.1 349569

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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