PHATRDRAFT_31584 mule cg5505-isoform a (Peptidase_C19)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_31584	chr_1	mule cg5505-isoform a (Peptidase_C19)	433311	435167	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0404

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0170	0.28	26000 27000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Peptidase_C19		Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove...	cl02553	136.074	2.78E-36	400 - 616	specific	239072
Peptidase_C19 superfamily		Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove...	-	60.677	2.89E-10	135 - 227	superfamily	261337
Peptidase_C19 superfamily		Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove...	-	60.677	2.89E-10	135 - 227	superfamily	261337
UCH		Ubiquitin carboxyl-terminal hydrolase; Ubiquitin carboxyl-terminal hydrolase.	-	127.139	1.46E-32	137 - 615	multi-dom	249862

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	271717	325255	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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