PHATRDRAFT_32087 cyclin a homolog (Cyclin_C)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_32087	chr_1	cyclin a homolog (Cyclin_C)	1652025	1652918	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0316

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0112	0.35	180 1300

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CYCLIN		Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control....	cl00050	35.6773	0.00195524	48 - 137	specific	238003
CYCLIN superfamily		Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control....	-	53.0207	3.80E-09	147 - 206	superfamily	260157
Cyclin_C		Cyclin, C-terminal domain; Cyclins regulate cyclin dependent kinases (CDKs). Human CCNO is a Uracil...	cl00050	53.0207	3.80E-09	147 - 206	specific	251658
CYCLIN superfamily		Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control....	-	53.0207	3.80E-09	147 - 206	superfamily	260157

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	175431	180282	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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