PHATRDRAFT_32178 nuclear division rft1 (MATE_like superfamily)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_32178	chr_1	nuclear division rft1 (MATE_like superfamily)	1888338	1889755	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0152

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0091	0.41

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
MATE_like superfamily		Multidrug and toxic compound extrusion family and similar proteins; The integral membrane proteins...	-	228.38	3.48E-69	31 - 422	superfamily	263758

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
25248		Not available	148456	322611	Not available	Not available	AT5G07630.1	259769

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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