PHATRDRAFT_33295 hira (arabidopsis homolog of histone chaperone hira) nucleotide binding protein binding (WD40 superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_33295 chr_3 hira (arabidopsis homolog of histone chaperone hira) nucleotide binding protein binding (WD40... 542624 546324 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0189

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 71.5972 1.29E-13 253 - 569 superfamily 238121
Hira superfamily TUP1-like enhancer of split; The Hira proteins are found in a range of eukaryotes and are... - 63.8338 2.03E-11 1024 - 1157 superfamily 254293
WD40 WD domain, G-beta repeat; WD domain, G-beta repeat. cl02567 41.5751 9.44E-05 103 - 134 specific 249832
WD40 superfamily WD domain, G-beta repeat; WD domain, G-beta repeat. - 41.5751 9.44E-05 103 - 134 superfamily 261348
COG2319 FOG: WD40 repeat [General function prediction only] - 68.5767 4.53E-12 92 - 459 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
25688 Not available 212461 260493 61017 Cre13.g575950.t1.2 AT3G44530.2 313159

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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