PHATRDRAFT_33427 riboflavin biosynthesis protein (Riboflavin_deaminase-reductase)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_33427	chr_3	riboflavin biosynthesis protein (Riboflavin_deaminase-reductase)	882849	884009	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0060

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0050	0.33	0.032 2400

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Riboflavin_deaminase-reductase		Riboflavin-specific deaminase. Riboflavin biosynthesis protein RibD (...	cl00269	134.284	4.24E-38	53 - 214	specific	238611
cytidine_deaminase-like superfamily		Cytidine and deoxycytidylate deaminase zinc-binding region. The family contains cytidine deaminases...	-	134.284	4.24E-38	53 - 214	superfamily	260314

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
269763		Not available	197036	254879	Not available	Cre12.g555951.t1.1	AT4G20960.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments