PHATRDRAFT_34196 tetratricopeptide repeat domain protein (TPR)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_34196 chr_4 tetratricopeptide repeat domain protein (TPR) 1348875 1349990 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0293

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 39.6708 0.000136143 210 - 280 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 39.6708 0.000136143 210 - 280 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 39.6708 0.000136143 210 - 280 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 39.6708 0.000136143 210 - 280 superfamily 238112
TPR_12 Tetratricopeptide repeat; Tetratricopeptide repeat. - 37.3566 0.00076864 247 - 320 multi-dom 257749
TPR_12 Tetratricopeptide repeat; Tetratricopeptide repeat. - 37.3566 0.00076864 247 - 320 multi-dom 257749
TPR_12 Tetratricopeptide repeat; Tetratricopeptide repeat. - 37.3566 0.00076864 247 - 320 multi-dom 257749

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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