PHATRDRAFT_34538 eukaryotic translation initiation factor 2 alpha subunit (eif-2-alpha) (PTZ00248)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_34538 chr_5 eukaryotic translation initiation factor 2 alpha subunit (eif-2-alpha) (PTZ00248) 851746 852708 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0142

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0209
 0.23

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
S1_IF2_alpha S1_IF2_alpha: The alpha subunit of translation Initiation Factor 2, S1-like RNA-binding domain. S1-... cl09927 135.404 1.48E-39 30 - 105 specific 239899
S1_like superfamily S1_like: Ribosomal protein S1-like RNA-binding domain. Found in a wide variety of RNA-associated... - 135.404 1.48E-39 30 - 105 superfamily 263921
EIF_2_alpha superfamily Eukaryotic translation initiation factor 2 alpha subunit; These proteins share a region of... - 144.594 1.25E-42 141 - 256 superfamily 254274
EIF_2_alpha superfamily Eukaryotic translation initiation factor 2 alpha subunit; These proteins share a region of... - 144.594 1.25E-42 141 - 256 superfamily 254274
PTZ00248 eukaryotic translation initiation factor 2 subunit 1; Provisional - 395.571 1.39E-137 16 - 320 multi-dom 240329

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
105 Not available 267694 201433 366908 Cre12.g490000.t1.2 AT2G40290.1 356047

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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