PHATRDRAFT_34685 abc transporter family protein (3a01204)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_34685	chr_6	abc transporter family protein (3a01204)	133675	135901	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0367

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0238	0.34	0.000000000099 38

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ABC_ATPase superfamily		ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of...	-	236.399	2.37E-73	28 - 260	superfamily	266551
ABC2_membrane		ABC-2 type transporter; ABC-2 type transporter.	cl17235	145.093	4.44E-40	336 - 547	specific	250332
ABC2_membrane superfamily		ABC-2 type transporter; ABC-2 type transporter.	-	145.093	4.44E-40	336 - 547	superfamily	266576
3a01204		The Eye Pigment Precursor Transporter (EPP) Family protein; [Transport and binding proteins, Other].	-	404.814	8.26E-133	26 - 602	multi-dom	233207

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	442986	Not available	Not available	255978

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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