PHATRDRAFT_34949 Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_34949	chr_6		741068	742200	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0440

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PGAP1 superfamily		PGAP1-like protein; The sequences found in this family are similar to PGAP1. This is an endoplasmic...	-	44.2738	1.41E-05	120 - 236	superfamily	203773
Hydrolase_4 superfamily		Putative lysophospholipase; This domain is found in bacteria and eukaryotes and is approximately...	-	39.0275	0.000977558	55 - 170	superfamily	267493
Abhydrolase_6		Alpha/beta hydrolase family; This family contains alpha/beta hydrolase enzymes of diverse...	-	35.6025	0.00925221	108 - 186	multi-dom	257231

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
22418		Not available	197631	294262	213548	Cre01.g025150.t1.2	AT5G17670.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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