PHATRDRAFT_35637 short-chain dehydrogenase reductase sdr (NADB_Rossmann superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_35637 chr_8 short-chain dehydrogenase reductase sdr (NADB_Rossmann superfamily) 411973 413880 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0030

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0053
 0.47

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SDR_c classical (c) SDRs; SDRs are a functionally diverse family of oxidoreductases that have a single... cl09931 175.935 1.46E-50 392 - 608 specific 212491
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 184.895 5.84E-53 16 - 346 superfamily 263925
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 184.895 5.84E-53 16 - 346 superfamily 263925
COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] - 152.022 5.40E-42 388 - 631 multi-dom 226674
WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate... - 97.3201 2.85E-22 16 - 366 multi-dom 223528

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
262272 Not available 229357 282211 232614 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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