PHATRDRAFT_35741 Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_35741	chr_8		643591	647703	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0314

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0221	0.32	520 66000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
LRR_4 superfamily		Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number...	-	45.1683	6.96E-06	390 - 431	superfamily	257306
LRR_4 superfamily		Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number...	-	45.1683	6.96E-06	390 - 431	superfamily	257306
LRR_RI superfamily		Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue...	-	47.7354	9.70E-06	305 - 448	superfamily	238064
LRR_8		Leucine rich repeat; Leucine rich repeat.	-	37.9025	0.00206948	336 - 378	multi-dom	258126
LRR_8		Leucine rich repeat; Leucine rich repeat.	-	37.9025	0.00206948	336 - 378	multi-dom	258126

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	236227	287592	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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