PHATRDRAFT_35973 phenazine biosynthesis proteinfamily (COG0384)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_35973	chr_9	phenazine biosynthesis proteinfamily (COG0384)	244447	245400	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0129

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0199	0.23	68 940

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DAP_epimerase superfamily		Diaminopimelate epimerase; Diaminopimelate epimerase contains two domains of the same alpha/beta...	-	42.3441	7.14E-05	62 - 304	superfamily	268077
COG0384		Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	-	78.8948	3.11E-17	13 - 313	multi-dom	223461

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
3804		Not available	256899	324032	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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