PHATRDRAFT_36397 polya polymerase (CBS_pair superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_36397 chr_10 polya polymerase (CBS_pair superfamily) 350619 352936 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0037

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 67.5729 8.08E-14 423 - 483 superfamily 238008
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 67.5729 8.08E-14 423 - 483 superfamily 238008
CBS_pair superfamily The CBS domain, named after human CBS, is a small domain originally identified in cystathionine... - 86.4999 6.30E-20 577 - 721 superfamily 265675
DHHA1 superfamily DHHA1 domain; This domain is often found adjacent to the DHH domain pfam01368 and is called DHHA1... - 35.7569 0.00647803 496 - 560 superfamily 251196
DHHA1 superfamily DHHA1 domain; This domain is often found adjacent to the DHH domain pfam01368 and is called DHHA1... - 35.7569 0.00647803 496 - 560 superfamily 251196
COG0517 FOG: CBS domain [General function prediction only] - 57.4813 6.51E-10 572 - 719 multi-dom 223591
EF-hand_7 EF-hand domain pair; EF-hand domain pair. - 53.9269 4.27E-09 432 - 483 multi-dom 257819
COG0618 Exopolyphosphatase-related proteins [General function prediction only] - 75.8849 4.45E-15 111 - 370 multi-dom 223691

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
21622 Not available 269674 261522 194023 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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