PHATRDRAFT_36517 immediate-early fungal elicitor protein (Ubox)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_36517	chr_10	immediate-early fungal elicitor protein (Ubox)	648023	648535	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0294

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0194	0.22	340 17000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Ubox		Modified RING finger domain; Modified RING finger domain, without the full complement of Zn2+-...	cl17544	76.5049	7.87E-19	24 - 87	specific	128780
U-box superfamily		U-box domain; This domain is related to the Ring finger pfam00097 but lacks the zinc binding...	-	76.5049	7.87E-19	24 - 87	superfamily	266741

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	165514	113639	Not available	Cre01.g016800.t1.1	AT3G11840.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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