PHATRDRAFT_36906 transcription factor apfi-like (LbH_gamma_CA_like)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_36906	chr_11	transcription factor apfi-like (LbH_gamma_CA_like)	632474	633394	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0168

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
LbH_gamma_CA_like		Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA),...	cl00160	169.9	5.55E-52	70 - 245	specific	100051
LbetaH superfamily		Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each...	-	169.9	5.55E-52	70 - 245	superfamily	260227
PaaY		Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily [General function prediction...	-	149.661	6.30E-44	68 - 248	multi-dom	223735

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
31215		Not available	260956	157425	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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