PHATRDRAFT_36928 cupin region (Cupin_2)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_36928 chr_11 cupin region (Cupin_2) 680409 680948 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0307

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0219
 0.22

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Cupin_2 Cupin domain; This family represents the conserved barrel domain of the 'cupin'... cl17218 55.3397 3.93E-11 96 - 168 specific 254486
Cupin_2 superfamily Cupin domain; This family represents the conserved barrel domain of the 'cupin'... - 55.3397 3.93E-11 96 - 168 superfamily 266563

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available 288643 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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